Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 27034
Gene Symbol: ACAD8
ACAD8
0.010 Biomarker group BEFREE When compared with IBD diagnosed in older children, VEO-IBD has some distinct characteristics such as a higher likelihood of an underlying monogenic etiology or primary immune deficiency. 31833544 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker group BEFREE Besides, proinflammatory cytokines such as, IFN-γ, TNF-α, IL-6, and IL-17 were significantly diminished in the serum and spinal cord of EAE mice receiving HIV-1 Tat clade B and C. Conversely, anti-inflammatory cytokines, including IL-10 and IL-4 were elevated in the serum and spinal cord of EAE mice receiving HIV Tat clade B and C when compared with the control group. 31830622 2020
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.080 Biomarker group BEFREE Besides, proinflammatory cytokines such as, IFN-γ, TNF-α, IL-6, and IL-17 were significantly diminished in the serum and spinal cord of EAE mice receiving HIV-1 Tat clade B and C. Conversely, anti-inflammatory cytokines, including IL-10 and IL-4 were elevated in the serum and spinal cord of EAE mice receiving HIV Tat clade B and C when compared with the control group. 31830622 2020
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.020 Biomarker group BEFREE Besides, proinflammatory cytokines such as, IFN-γ, TNF-α, IL-6, and IL-17 were significantly diminished in the serum and spinal cord of EAE mice receiving HIV-1 Tat clade B and C. Conversely, anti-inflammatory cytokines, including IL-10 and IL-4 were elevated in the serum and spinal cord of EAE mice receiving HIV Tat clade B and C when compared with the control group. 31830622 2020
Entrez Id: 3695
Gene Symbol: ITGB7
ITGB7
0.010 Biomarker group BEFREE Intestinal lymphoid defects caused by ITGB7 deficiency have not previously been recognized in KS and these results provide new mechanistic insights into the pathogenesis of Kabuki associated immune deficiency. 31816409 2020
Entrez Id: 5155
Gene Symbol: PDGFB
PDGFB
0.010 Biomarker group BEFREE Among the above niche factors tested, MSCs transduced with PDGFB (PDGFB-MSCs) most significantly improved human HSC engraftment in immunodeficient mice. 31804621 2019
Entrez Id: 6443
Gene Symbol: SGCB
SGCB
0.010 Biomarker group BEFREE Furthermore, the injection of miR‑337‑3p‑overexpressing SGC‑7901 cells into an immunodeficient mouse model resulted in a decrease in tumor metastasis in the liver and lungs. 31789419 2020
Entrez Id: 57217
Gene Symbol: TTC7A
TTC7A
0.010 GeneticVariation group BEFREE Mutations in the tetratricopeptide repeat domain 7A (TTC7A) gene cause very early onset inflammatory bowel diseases (VOIBD) or multiple intestinal atresia associated with immune deficiency of various severities, ranging from combined immune deficiency to mild lymphopenia. 31787977 2019
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.100 Biomarker group BEFREE Although nuances exist between SCID and NOD/SCID mice, an increase in the protective microbiota, in particular <i>Lactobacillus</i>, contributed the most to the discrimination of immunodeficient and control mice. 31781050 2019
Entrez Id: 952
Gene Symbol: CD38
CD38
0.090 AlteredExpression group BEFREE The best predictor of HIV DNA at 1 year was pre-ART HIV DNA, which was in turn significantly associated with CD8 memory T-cell differentiation (effector memory, naive, and T-bet-Eomes- subsets), CD8 T-cell activation (CD38 expression) and T-cell immunoglobulin and mucin-domain containing-3 (Tim-3) expression on memory T cells. 31776569 2020
Entrez Id: 84868
Gene Symbol: HAVCR2
HAVCR2
0.030 AlteredExpression group BEFREE The best predictor of HIV DNA at 1 year was pre-ART HIV DNA, which was in turn significantly associated with CD8 memory T-cell differentiation (effector memory, naive, and T-bet-Eomes- subsets), CD8 T-cell activation (CD38 expression) and T-cell immunoglobulin and mucin-domain containing-3 (Tim-3) expression on memory T cells. 31776569 2020
Entrez Id: 23324
Gene Symbol: MAN2B2
MAN2B2
0.010 Biomarker group BEFREE Defining a new immune deficiency syndrome: MAN2B2-CDG. 31775018 2020
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.130 Biomarker group BEFREE Our findings reveal an α-actinin-mediated dynamic cortical actin rearrangement for HIV entry, and identify an antiviral target as well as a corresponding peptide inhibitor based on HIV interaction with the actin cytoskeleton. 31773115 2020
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker group BEFREE It uses the Plasmatherm system for thawing, followed by CD34 microbead magnetic-activated cell sorting isolation with a cell separation kit (Whole Blood Columns, Miltenyi Biotec). hCD34 + HSPC phenotypes and functionality were assessed in vitro and hematologic reconstitution determined in vivo in immunodeficient mice. 31769050 2019
Entrez Id: 100133941
Gene Symbol: CD24
CD24
0.030 Biomarker group BEFREE Treatment of TRβ-expressing MCF-7 cells (MCF7-TRβ cells) with the thyroid hormone T3 decreased significantly CD44+/CD24- and ALDH+ cell subpopulations, the efficiency of mammosphere formation, the self-renewal capacity of CSCs in limiting dilution assays, the expression of the pluripotency factors in the mammospheres, and tumor initiating capacity in immunodeficient mice, indicating that the hormone reduces the CSC population present within the bulk MCF7-TRβ cultures. 31760908 2020
Entrez Id: 10587
Gene Symbol: TXNRD2
TXNRD2
0.010 Biomarker group BEFREE Since the thyroid hormone receptor β (TRβ) appears to suppress breast tumor growth and metastasis, we have analyzed the possibility that TRβ could affect the CSC population using MCF-7 cells grown under adherent conditions or as mammospheres, as well as inoculation into immunodeficient mice. 31760908 2020
Entrez Id: 7068
Gene Symbol: THRB
THRB
0.010 Biomarker group BEFREE Treatment of TRβ-expressing MCF-7 cells (MCF7-TRβ cells) with the thyroid hormone T3 decreased significantly CD44+/CD24- and ALDH+ cell subpopulations, the efficiency of mammosphere formation, the self-renewal capacity of CSCs in limiting dilution assays, the expression of the pluripotency factors in the mammospheres, and tumor initiating capacity in immunodeficient mice, indicating that the hormone reduces the CSC population present within the bulk MCF7-TRβ cultures. 31760908 2020
Entrez Id: 106480993
Gene Symbol: RN7SL263P
RN7SL263P
0.010 Biomarker group BEFREE Malaria/HIV co-infected patients had a significantly lower mean value of Hb (P = 0.002), RBC (P = 0.002) and Hct (P = 0.001) when compared with HIV-infected patients. 31752719 2019
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.010 AlteredExpression group BEFREE Here we documented that synergistic and transient expression of Runx1 and Hoxa9 restricted in the time window of endothelial-to-hematopoietic transition and hematopoietic maturation stages in a PSC differentiation scheme (iR9-PSC) in vitro induced preferential generation of engraftable hematopoietic progenitors capable of homing to thymus and developing into mature T cells in primary and secondary immunodeficient recipients. 31729468 2020
Entrez Id: 3205
Gene Symbol: HOXA9
HOXA9
0.010 AlteredExpression group BEFREE Here we documented that synergistic and transient expression of Runx1 and Hoxa9 restricted in the time window of endothelial-to-hematopoietic transition and hematopoietic maturation stages in a PSC differentiation scheme (iR9-PSC) in vitro induced preferential generation of engraftable hematopoietic progenitors capable of homing to thymus and developing into mature T cells in primary and secondary immunodeficient recipients. 31729468 2020
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.100 Biomarker group BEFREE We employed a humanized model of SLE by transferring PBMCs from lupus patients to immunodeficient non-obese diabetic-severe combined immunodeficient (NOD-SCID) mice. 31724735 2020
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.040 Biomarker group BEFREE We review this recently identified acquired form of autoimmune immune deficiency and discuss the potential applications of granulocyte-macrophage colony-stimulating factor antibody testing by enzyme-linked immunosorbent assay. 31713345 2019
Entrez Id: 4485
Gene Symbol: MST1
MST1
0.010 GeneticVariation group BEFREE In particular, patients bearing a loss-of-function mutation of Mst1 develop a complex immunodeficiency syndrome. 31699221 2019
Entrez Id: 5927
Gene Symbol: KDM5A
KDM5A
0.010 Biomarker group BEFREE Adoptive transfer of NUP98-KDM5A-transformed cells into immunodeficient mice led to multiple subtypes of leukemia, including AMKL, that phenocopy human disease phenotypically and molecularly. 31698461 2019
Entrez Id: 947
Gene Symbol: CD34
CD34
0.100 Biomarker group BEFREE To determine the extent to which BCP-ALL RT programs mirror or deviate from specific stages of normal human B-cell differentiation, we transplanted immunodeficient mice with quiescent normal human CD34+ cord blood cells and obtained RT signatures of the regenerating B-lineage populations. 31698451 2019